Structure of 66728-98-1
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CAS No. : | 66728-98-1 |
Formula : | C9H5BrClN |
M.W : | 242.50 |
SMILES Code : | ClC1=NC=C(Br)C2=C1C=CC=C2 |
MDL No. : | MFCD00234469 |
InChI Key : | HRWILRGBDZGABZ-UHFFFAOYSA-N |
Pubchem ID : | 459766 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H332-H335 |
Precautionary Statements: | P261-P280-P305+P351+P338 |
Num. heavy atoms | 12 |
Num. arom. heavy atoms | 10 |
Fraction Csp3 | 0.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 1.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 54.45 |
TPSA ? Topological Polar Surface Area: Calculated from |
12.89 ?2 |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.34 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
3.75 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
3.65 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
3.12 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
3.76 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
3.32 |
Log S (ESOL):? ESOL: Topological method implemented from |
-4.32 |
Solubility | 0.0115 mg/ml ; 0.0000476 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
Log S (Ali)? Ali: Topological method implemented from |
-3.71 |
Solubility | 0.0469 mg/ml ; 0.000194 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-5.17 |
Solubility | 0.00162 mg/ml ; 0.00000668 mol/l |
Class? Solubility class: Log S scale |
Moderately soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
Yes |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-5.12 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<2.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.66 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
98% | In 1,4-dioxane; for 1h;Microwave irradiation; Sealed tube; Heating; | General procedure: Morpholine (10 mmol), 7-bromo-1-chloroisoquinoline (2 mmol) and 1,4-dioxane (5ml) were dissolved in 10 ml of vial tube. The vial was sealed with a crimp cap and placed in a Biotage initiator microwave cavity. The reaction mixtures were heated 1h at 120 oC. The resulting mixture was evaporated in vacuum. The product was extracted with ethyl acetate. The ethyl acetate layer was dried over anhydrous magnesium sulfate, filtered, and concentrated. The product was purified by silica gel column chromatography using hexane : ethyl acetate = 1:1.7-Bromo-1-(4-morpholinyl)isoqinoline (2a) was obtained in 99 % yield as a brown solid; mp: 129-130; 1H NMR(CDCl3, 300 MHz) delta 8.21 (s, 1H), 8.17 (d, J = 5.7 Hz, 1H), 7.81 (s, 2H), 7.47 - 7.35 (m, 2H), 7.29 (d, J = 5.6 Hz, 1H), 7.10 (t, J = 8.7 Hz, 1H), 4.05 - 3.91 (m, 7H), 3.45 (t, 4H); 13C NMR (75 MHz, CDCl3) delta 160.3, 141.2, 136.6, 133.2, 129.0, 127.8, 122.8, 119.9, 115.9, 67.0, 51.9; MS(m/z) : 293.17 (M+1). The following compounds (2b-f) were prepared with general procedure for nucleophlic substitution of 1-chloro-4 or 7-bromoisoquinoline. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
72% | With trichlorophosphate; In chloroform; at 0 - 20℃; for 1.5h;Heating / reflux; | 2d) 4-BROMO-1-CHLORO-ISOQUINOLINE To a solution of 4-bromoisoquinoline (52. 08 g, 0. 250 MOL) in methylene chloride (600 mL) is added m-chloroperbenzoic acid (64.47 g, 0.250 MOL). The mixture is stirred for 2.5 hours. To the mixture is added 1.5 g of m-chloroperbenzoic acid and the mixture is stirred for 30 minutes. The solution is washed with 1 N NAOH, brine, and then dried over sodium sulfate. The solvent is removed to give a white solid. The solid is crystallized from hot acetone to yield 32.22 g (57.6%) of a white SOLID. 1H, 13C NMR consistent with structure. The N-oxide (15.75 g, 0.0703 mol) is dissolved in chloroform (50 mL) and cooled in an ice bath. Phosphorus OXYCHLORIDE (20 mL) is added dropwise and then the mixure is warmed to room temperature and then heated to reflux for 1.5 hours. The mixture is allowed to cool to room temperature and is then poured over ice. The aqueous mixture is neutralized to pH 7-8 with NAHCO3 AND then extracted with chloroform. The organic phase is washed with brine, dried over sodium sulfate and the solvent is removed. The residue is purified by flash chromatography (SIO2/5% ETHYL acetate/hexanes). Collected 12.22 g (72%). M+H = 389. 'H NMR ; 5 8. 50 (s, 1H), 8.40 (d, 1H), 8.20 (d, 1H), 7.92 (t, 1H), 7.79 (t, 1H). |
52% | With trichlorophosphate; In dichloromethane; N,N-dimethyl-formamide; at 0 - 25℃;Inert atmosphere; | General procedure: To a stirred solution of the appropriate azine N-oxides in anhydrous CH2Cl2 (0.1M) at 0 C is added POCl3 (1.2 equiv) followed by dropwise addition of DMF (0.5 equiv) under argon. The resulting reaction mixture was warmed to 25 C and stirred for several hours until the reaction is complete as indicated by TLC. Saturated aqueous sodium carbonate solution is added to the reaction mixture slowly to adjust the pH to 7~8. The resulting mixture is separated and the aqueous phase is extracted with CH2Cl2 thoroughly. The organic phase is combined and washed with brine, dried over Na2SO4, filtered and concentrated under reduced pressure to afford the crude product, which is purified by flash column chromatography using PE/EA (80:1) as eluent. |
With sodium hydrogencarbonate; trichlorophosphate; In dichloromethane; 1,2-dichloro-ethane; | (b) A yellow suspension of 4-bromoisoquinoline N-oxide, P-1a, (6.9 g, 30.8 mmol. 1.0 eq) in 1,2-dichloroethane (60 mL) was treated with phosphorus oxychloride (Aldrich, 9.0 mL, 96.4 mmol, 1.8 eq) and warmed to 80 C. After 1.5 hours, the resultant green suspension was carefully poured into a cold solution of 50% saturated sodium bicarbonate (500 mL) and the aqueous layer was extracted with diethyl ether (3*300 mL). The combined organic extracts were washed with water (200 mL), brine (200 mL), dried over magnesium sulfate, and concentrated under reduced pressure to give a tan solid (6.8 g). The crude product was dissolved in a minimal amount of dichloromethane and purified by flash chromatography over silica gel using 5% ether/cyclohexane to give 4-bromo-1-chloro-isoquinoline, P-1b, as a white solid (5.7 g, 77%): HPLC Rf=15.4 min.; TLC Rf=0.4 (5% ether/cyclohexane); 1H NMR (300 MHz, DMSO-d6) delta8.68 (s, 1H), 8.42 (d, 1H, J=8.4 Hz), 8.26 (d, 1H, J=8.3 Hz), 8.15 (t, 1H, J=7.6 Hz), 8.02 (t, 1H, J=7.6 Hz); 13C NMR (75 MHz, DMSO-d6) delta150.4, 143.0, 135.8, 133.8, 130.8, 127.3, 126.8, 126.5, 119.0; MS (ESI) m/z 242/244 [M+H]+. |
115 mg | With trichlorophosphate; In N,N-dimethyl-formamide; toluene; at 20℃;Inert atmosphere; Cooling with ice; | 4-Bromoisoquinoline (34) (200 mg, 0.961 mmol), Na2WO4·H2O (32 mg, 0.096 mmol), AcOH (5 ml) and 30% H2O2 (297 mul, 88 mmol) were added in the reaction flask and the mixture was stirred at 80 C for 3 h. After cooling 50 ml of CH2Cl2 was added and the organic phase washed with saturated NaHCO3 and water. After drying the organic phase with anhydrous Na2SO4 and removal of the solvent under vacuum, 240 mg of crude N-oxide 35 was obtained. The crude 35 was dissolved in mixture of dimethylformamide (1.5 ml) and toluene (4.5 ml) and phosphorus oxychloride (176 mul, 1.92 mmol,) was added in ice cooled reaction mixture under argon. The reaction mixture was stirred at rt for 1 h and then partitioned between EtOAc and water. The organic layer was washed with saturated NaHCO3 (twice), water, dried over anhydrous Na2SO4, and solvent removed under vacuum. The residue (270 mg) was purified by silica gel flash chromatography (2.5% EtOAc-petroleum ether) to give 115 mg (total yield 49%) of 36 as a white solid. 1H NMR (CDCl3): delta 8.48 (s, 1H); 8.35 (d, 1H, J = 8.5 Hz); 8.20 (d, 1H, J = 8.5 Hz); 7.87 (t, 1H, J = 7.6 Hz); 7.77 (t, 1H, J = 7.6 Hz). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
88% | In methanol; at 70℃; | Example I 4-BROMO-1-METHOXYISOQUINOLINE A solution of 0. 5 g (2. 1 mmol) <strong>[66728-98-1]4-bromo-1-chloroisoquinoline</strong> in 10 mL (5 mmol) 0. 5 M sodium methoxide in methanol was heated to 70 C for overnight with stirring, then cooled to a4mbient temperature and diluted with 30 mL water to produce copious white precipitate. The mixture was cooled to 0 C for 60 minutes, then filtered, washed with water, and air-dried to produce 0. 44 g (1. 8 mmol, 88%) of the title compound as a white, waxy solid. 1H-NMR (300 MHz, CDC13, 6) : 8. 25 (D, J = 8 Hz, 1H), 8. 18 (s, 1H), 8. 06 (d, J= 8 Hz, 1H), 7. 78 (td, J= 1 Hz, 7 Hz, 1H), 7. 60 (td, J= 1 Hz, 7 Hz, 1H), 4. 12 (s, 3H) ; m/z : 239 [M+H] +. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
71% | 2e) 4-Boronic ACID-1-CHLORO-ISOQUINOLINE To a-74C solution OF 4-BROMO-1-CHLORO-ISOQUINOLINE (1. 25 g, 5.2 MMOL) in anhydrous THF (30 mL) is added dropwise n-BuLi (2.5 M in hexane, 2.3 mL, 5.7 mmol) over 45 minutes. Triisopropyl borate (1.4 mL, 6.1 MMOL) IN ADDED dropwise, and the mixture is stirred AT-74C for 2 hours. Upon warming to room temperature, the reaction is quenched with 3 mL water via syringe. After concentrating to an aqueous mixture, the reaction is acidified with 1 N HCI (aqueous) to a pH of approximately 1, which produced a white solid. The solid product is collected by filtration and dried (760 mg, 71%). M+H1 = 207. 9. 'H NMR (DMSO-D6) ; No. 8.72 (bs, 2H), 8.53 (d, 1H), 8. 47 (s, 1H), 8.31 (d, 1H), 7.90 (t, 1 H), 7.80 (t, 1 H). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
tetrakis(triphenylphosphine) palladium(0); In tetrahydrofuran; at 25℃; for 12h; | In a 40 mL vial 490 mg (2.00 mmol) l-chloro-4-bromo-isoquinoline and 40 mg (0.034 mmol) tetrakis(triphenylphosphine)palladium(0) is added to 4 mL THF. After all solids are dissolved, 8 mL of 0.5 M (4.0 mmol) benzyl zinc bromide in THF is slowly added by <n="101"/>syringe and the resulting reaction mixture is stirred at 25C. After 12 hrs, the mixture is poured into cold solution of saturated NH4Cl and extracted with EtOAc. The organic extracts are concentrated in vacuo and the resulting residue is purified by silica chromatography using a heptane/EtOAc gradient. Pure fractions are pooled and evaporated to give 150 mg (0.50 mmol) of the title compound. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With trifluoroacetic acid; In iso-butanol; at 100℃;Sealed tube; | Example 26 Synthesis of 4-(4-bromoisoquinolin-1-ylamino)phenol hydrochloride A mixture of 4-aminophenol (225 mg, 2062 mumol) and <strong>[66728-98-1]4-bromo-1-chloroisoquinoline</strong> (500 mg, 2062 mumol) was heated in sec-butanol (15 mL) in a sealed tube at 100 C. for 2 hours. TFA (477 mul, 6186 mumol) was added and the reaction mixture was allowed to stir at 100 C. overnight. LCMS analysis showed conversion to 4-(4-bromoisoquinolin-1-ylamino)phenol hydrochloride. The dark red reaction mixture was cooled, and diethyl ether was added. The resulting precipitate was filtered and washed with diethyl ether, and the solid was dried in vacuo to provide 4-(4-bromoisoquinolin-1-ylamino)phenol hydrochloride as a purple solid. | |
Example 14 Synthesis of 4-(4-bromoisoquinolin-l-ylamino)phenol hydrochloride; A mixture of 4-aminophenol (225 mg, 2062 mumol) and 4-bromo-l-chloroisoquinoline (500 mg, 2062 mumol) was heated in sec-butanol (15 mL) in a sealed tube at 100 0C for 2 <n="58"/>A- 1401 -WO-PCT - 57 -hours. TFA (477 mul, 6186 mumol) was added and the reaction mixture was allowed to stir at 100 0C overnight. LCMS analysis showed conversion to 4-(4-bromoisoquinolin-l- ylamino)phenol hydrochloride. The dark red reaction mixture was cooled, and diethyl ether was added. The resulting precipitate was filtered and washed with diethyl ether, and the solid was dried in vacuo to provide 4-(4-bromoisoquinolin-l-ylamino)phenol hydrochloride as a purple solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
94% | 4a) 1-Chloro-[4,7']biisoquinolinyl A solution of 4-BROMO-1-CHLOROISOQUINOLINE (see Example 2d) (5.0 g, 20.7 MMOL) in 150 mL THF is cooled TO-78C. A solution of n-BuLi (1.6 M in hexanes) (15 mL, 24 MMOL) is added dropwise and the reaction temperature is maintained AT-78C--68C. The reaction mixture is kept stirring AT-78C for 30 minutes. ZNBR2 (dried under vacuum at 80C) (6.5 g, 24.9 MMOL) is dissolved in 50 mL THF and is transferred to above mixture slowly AT-78C. The solution is stirred 40 minutes AT-78C, then warmed to room temperature by removing the cooling bath. Pd (PPh3) 4 (2.4 g, 2.1 mmol is added followed by TRIFLUOROMETHANESULFONIC acid ISOQUINOLIN-7-YL ESTER- (5.7 G, 20. 7 MMOL) in 50 mL THF. The reaction mixture is heated to 60C for 30 minutes and is then concentrated. The resulting oil is dissolved in dichloromethane and washed with saturated NAHCO3. ORGANIC phase is separated, dried (MgS04) and concentrated to give a yellow solid. The solid is collected by filtration, washed with ether then hexane and dried under vacuum. 5.68 G (94%) yellow solid is obtained. m. p. 169.0-169. 6C. H NMR (400 MHz, DMSO-d6) d 9.44 (s, 1 H) ; 8.61 (d, 1 H, J=5.6 Hz); 8.45-8. 43 (m, 1H) ; 8.40 (s, 1H) ; 8.34 (s, 1H) ; 8.18 (d, 1H, J=8.1 Hz); 7.97-7. 90 (m, 5H) ppm. API-MS, m/z 291. 14 ([M+H]+, calcd. 291.06). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
97.6% | 6b) 6- (1-CHLORO-ISOQUINOLIN-4-VL)-QUINAZOLINE A solution of 4-BROMO-1-CHLORO-ISOQUINOLINE (see Compound 2d) (4.74 g, 19.52 MMOL) in 300 mL THF is cooled TO-72C. A solution of n-BuLi (2.5 M in hexanes) (9.37 mL, 23.42 MMOL) IS ADDED dropwise and the reaction temperature maintained AT-70C--68C for 30 minutes. ZnBr2 (4.84 mg, 21.47 MMOL) is dissolved in 50 mL THF and is transferred to above mixture SLOWLY AT-70C. The solution is stirred 20 minutes AT-70C, then warmed to room temperature. Pd (PPH3) 4 (2.25 g, 1.95 MMOL) and 6-iodoquinazoline (5 g, 19.52 MMOL) in 4 mL THF are added to the reaction mixture dropwise in the order. Then the reaction mixture is heated to 60C for 30 minutes, then kept at room temperature overnight. The reaction mixture is quenched with NH4CI and extracted with ethyl acetate. White solid (4.0 g) is collected by filtration. The organic solution is washed with saturated NH4CI, then brine and dried over sodium sulfate. The solution is concentrated until white solid comes out from solution. The solid is collected by filtration, washed with ether and dried under vacuum. 1.53 g solid is obtained. Yield is 97.6%. H NMR (DMSO, 400 MHz) ; 8 9. 73 (s, 1H), 9.40 (s, 1H), 8. 48 7. 8. 44 (m, 1H), 8.42 (s, 1H), 8.40 (s, 1 H), 8.21 (s, 3H), 7.96-7. 9 (m, 3H). API-MS M/Z 292. 02 ([M+H] +, CALCD. 292.06). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
46% | 18b) 4-BENZVLOXY-6- (1-CHLORO-ISOQUINOLIN-4-VL)-QUINAZOLINE A solution OF 4-BROMO-1-CHLORO-ISOQUINOLINE (802 mg, 3.31 MMOL} in THF (20 mL) is cooled TO-72C. A solution of n-BuLi (2.5 M in hexanes) (1.6 mL, 3.97 MMOL) is added dropwise and the reaction temperature maintained at-70C for 30 min. ZnBr2 (900 mg, 4.2 MMOL) is dissolved in THF (6 mL) and is transferred to above mixture slowly at-70 C. The solution is stirred 40 min AT-70 C, then warmed to room temperature. Pd (PPH3) 4 (400 mg, 0.36 MMOL) in THF (6 mL) and 4-benzyloxy-6-iodo-quinazoline (1.2 g, 3.31 MMOL) in THF (4 mL) are added to the reaction mixture dropwise. The solution is heated to 60 C for 30 min, then kept at rt overnight. The reaction mixture is diluted with ethyl acetate, washed with sat. NH4CI, then brine, and dried over sodium sulfate. The solution is concentrated until white solid precipitates from solution. The solid is collected by filtration, washed with ether and dried under vacuum. 600 mg OF 4-BENZYLOXY-6- (1-CHLORO-ISOQUINOLIN-4-YL)-QUINAZOLINE is obtained. Yield was 46%. MS/ESI+, M+1 = 397.96 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
56% | 19b) 1-CHLORO-4- (6-MORPHOLIN-4-VL-PVRAZIN-2-YL)-ISOQUINOLINE A solution of 4-BROMO-1-CHLORO-ISOQUINOLINE (400 mg, 1.65 MMOL) in THF (20 mL) is cooled TO-72°C. A solution of n-BuLi (2.5 M in hexanes) (0.80 mL, 2 MMOL) is added dropwise and the reaction temperature maintained AT-70 °C~-68°C FOR 30min. ZnBr2 (408 mg, 1.91 MMOL) is dissolved in THF (6 mL) and is transferred to above mixture slowly at-70 °C. The solution is stirred 40 min at-70 °C, then warmed to room temperature by removing the cooling bath. Pd (PPh3) 4 (190 mg, 0.164 MMOL) in 6ML THF and 4-(6-BROMO-PYRAZIN-2-YL)- morpholine (400 mg, 1.65 MMOL) in THF (4 mL) are added to the reaction mixture dropwise, then the solution is heated to 60 °C for 30 min and then kept at rt overnight. The reaction mixture is diluted with ethyl acetate, washed with sat. NH4CI . then brine, and dried over sodium sulfate. The solution is concentrated until white solid came out from solution. The solid is collected by filtration, washed with ether and dried under vacuum. 300 mg of 1- CHLORO-4- (6-MORPHOLIN-4-YL-PYRAZIN-2-YL)-ISOQUINOLINE IS obtained. Yield was 56percent. MS/ESI+, M+1 = 327 |
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