Structure of 54288-70-9
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CAS No. : | 54288-70-9 |
Formula : | C5H11Br2N |
M.W : | 244.96 |
SMILES Code : | BrC1CCNCC1.[H]Br |
MDL No. : | MFCD00191858 |
InChI Key : | LVTIZXGNLIKUQZ-UHFFFAOYSA-N |
Pubchem ID : | 2734676 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H319 |
Precautionary Statements: | P305+P351+P338 |
Num. heavy atoms | 8 |
Num. arom. heavy atoms | 0 |
Fraction Csp3 | 1.0 |
Num. rotatable bonds | 0 |
Num. H-bond acceptors | 1.0 |
Num. H-bond donors | 1.0 |
Molar Refractivity | 48.66 |
TPSA ? Topological Polar Surface Area: Calculated from |
12.03 ?2 |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
0.0 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.08 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
1.71 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.83 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.89 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.5 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.67 |
Solubility | 0.525 mg/ml ; 0.00214 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-1.96 |
Solubility | 2.67 mg/ml ; 0.0109 mol/l |
Class? Solubility class: Log S scale |
Very soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-1.93 |
Solubility | 2.86 mg/ml ; 0.0117 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.32 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
1.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
1.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.83 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | Step 1: Synthesis of 4-Bromo-piperidine-1-carboxylic acid tert-butyl ester To a suspension of 5 g (0.02 mol) of <strong>[54288-70-9]4-bromopiperidine hydrobromide</strong> salt in DCM (35 mL) are added 7.09 mL (0.04 mol) of N,N-diisopropylethyl amine dropwise at 0° C. The reaction mixture is stirred for 30 min, then a solution of 6.67 g (0.31 mol) of di-tert-butyl dicarbonate in DCM (35 mL) is added dropwise to the reaction mixture. The reaction mixture is stirred for 18 h at room temperature, then washed with 1M aqueous HCl solution (2*30 mL) and brine (30 mL). The organic layer is dried over Na2SO4, filtered and the filtrate is concentrated under reduced pressure to afford 6.9 g of 4-bromo-piperidine-l-carboxylic acid tert-butyl ester as a yellow oil. Yield quantitative; 1H NMR (250 MHz, CHLOROFORM-d) delta ppm 1.46 (9H, s), 1.79-2.00 (2H, m), 2.00-2.16 (2H, m), 3.31 (2H, ddd, J=13.67, 7.73, 3.73 Hz), 3.68 (2H, ddd, J=13.55, 6.85, 3.65 Hz), 4.34 (1H, tt, J=7.69, 3.81 Hz) | |
100% | With N-ethyl-N,N-diisopropylamine; In dichloromethane; at 0 - 20℃; | To a suspension of 5 g (0.02 mol) of Compound 29 salt in DCM (35 mL) are added 7.09 mL (0.04 mol) of N,N-diisopropylethyl amine dropwise at 0° C. The reaction mixture is stirred for 30 min, then a solution of 6.67 g (0.31 mol) of di-tert-butyl dicarbonate in DCM (35 mL) is added dropwise to the reaction mixture. The reaction mixture is stirred for 18 h at room temperature, washed with 1M aqueous HCl solution (2.x.30 mL) and brine (30 mL). The organic layer is dried over Na2SO4, filtered and the filtrate is concentrated under reduced pressure to afford 6.9 g of Compound 30 as a yellow oil. Yield quantitative; 1H NMR (250 MHz, CHLOROFORM-d) delta ppm 1.46 (9H, s), 1.79-2.00 (2H, m), 2.00-2.16 (2H, m), 3.31 (2H, ddd, J=13.67, 7.73, 3.73 Hz), 3.68 (2H, ddd, J=13.55, 6.85, 3.65 Hz), 4.34 (1H, tt, J=7.69, 3.81 Hz). |
98% | With triethylamine; In tetrahydrofuran; at 20℃; for 48h; | Triethylamine (2.3 mL, 16.3 mmol) and di-tert-butyl dicarbonate (1.9 g, 8.6 mmol) were added to astirred suspension of <strong>[54288-70-9]4-bromopiperidine hydrobromide</strong> (2.0 g, 8.2 mmol) in THF (40 mL). Thereaction mixture was stirred for 48 h at rt. The suspension was filtered and the filter was washedwith THF. The combined filtrate was evaporated in vacuo. Purification by flash chromatography(petroleum ether 40?60 °C/EtOAc, 95:5 v/v) afforded 19 (2.11 g, 98percent) as colourless oil |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
98% | With 4-methyl-morpholine; dmap; at 20℃; for 16h; | To a solution of <strong>[54288-70-9]4-bromopiperidine hydrobromide</strong> (3.0 g, 12.2 mmol) in tetrahydrofuran (30 ml) were added 1-[(benzyloxy)carbonyl]oxy}-2,5-pyrrolidinedione (3.20 g, 12.9 mmol), N-methylmorpholine (1.62 ml, 14.7 mmol) and 4-N,N-dimethylaminopyridine (30 mg) at room temperature, and stirred at room temperature for 16 hours. The reaction solution was poured into water and extracted with ethyl acetate. The organic layer was washed with a 1N-aqueous hydrochloric acid solution, dried over anhydrous magnesium sulfate and distilled under reduced pressure to remove the solvent, and the resulting residue was purified by a silica gel column chromatography (eluent: hexane/ethyl acetate = 1/1) to obtain benzyl 4-bromo-1-piperidinecarboxylate (3.58 g, 98percent). |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
98% | With triethylamine; In tetrahydrofuran; at 20℃; for 16h;Cooling with ice; | 4-Bromopiperidine hydrobromide (1.63mmol, 300 mg, 1.0 eq) was dissolved in dry tetrahydrofuran (5.0 mL). After cooling the reaction mixture in an ice bath, triethylamine (3.56 mmol, 485 muL, 2.2 eq) and benzoyl chloride (1.63 mmol, 190 muL, 1.0 eq) were slowly added. After overnight stirring at room temperature, the reaction mixture was concentrated under vacuum pressure, dissolved in dichloromethane and was successively washed with water and brine. The organic phase was dried over magnesium sulfate, filtered and concentrated under vacuum pressure. The resulting crude product was purified by flash chromatography (petroleum ether/ethyl acetate 90/10 10 minutes, then gradient until 100percent ethyl acetate in 10 minutes) to a colorless oil (214 mg, 98percent). TLC Rf: 0.77 (DCM/MeOH 95/5). IR (cm-1): 569, 638, 691, 702, 714, 787935, 996, 1139, 1209, 1263, 1270, 1335,1343, 1367, 1431, 1623, 2874, 2928. 1H NMR (300 MHz, CDCl3) delta(ppm): 1.70-2.42 (bs, 4 H); 3.15-4.19 (m, 4 H); 4.47 (sep, J = 3.6 Hz, 1 H); 7.38-7.47 (m, 5 H). 13C NMR (75 MHz,CDCl3) delta (ppm): 35.5 (CH2);35.9 (CH2); 40.3 (CH2); 45.9 (CH2); 48.9 (CH);126.9 (2 x CH); 128.6 (2 x CH); 129.8 (C) 135.7 (C); 170.4 (C). MS (DCI/CH4)m/z: 266.02 [M]. HRMS (DCI/CH4): for C12H13BrNO[M]: calcd: 266.0181 found: 266.0176. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
67% | With triethylamine; In N,N-dimethyl-formamide; at 100℃;Microwave irradiation; | To a microwave vial equipped with a magnetic stir bar, containing DMF (1 mL) was 2-bromobenzo[4,5]imidazo[ 1,2-a]pyrimidine (0.067 g, 0.27 mmol, 1.0 equiv), 4-bromopiperidine hydrochloride (0.099 g, 0.405 mmol, 1.5 equiv) and triethylamine (0.113 ml, 0.810 mmol, 3.0 equiv). The suspension was irradiated in a Biotage Initiator microwave reactor (250 W) at 100 °C for 10 min. After cooling to room temperature, the crude product was purifled by HPLC to afford 0.06 g (67percent) of T777P2 as a white solid. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
87% | In acetonitrile; at 20℃; | General procedure: To a stirred solution of 4-(bromomethyl)furoxan-3-carbonitrile 6 in acetonitrile (15 mL) the appropriate secondary amine was added, and the reaction mixture was stirred at room temperature for 1-6 h until complete conversion of the starting material, as monitored by TLC analysis. The solvent was removed under reduced pressure, the residue was dissolved in EtOAc and washed with water and brine. The combined organic layers were dried over sodium sulfate and concentrated to dryness. Purification by silica gel flash column chromatography gave the product as a free base, which was immediately transformed into the corresponding oxalate or trifluoroacetate. |
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