Structure of 33233-67-9
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CAS No. : | 33233-67-9 |
Formula : | C13H17NO4 |
M.W : | 251.28 |
SMILES Code : | O=C(O)C1=CC=C(CNC(OC(C)(C)C)=O)C=C1 |
MDL No. : | MFCD00228182 |
InChI Key : | LNKHBRDWRIIROP-UHFFFAOYSA-N |
Pubchem ID : | 853605 |
GHS Pictogram: |
![]() |
Signal Word: | Warning |
Hazard Statements: | H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 18 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.38 |
Num. rotatable bonds | 6 |
Num. H-bond acceptors | 4.0 |
Num. H-bond donors | 2.0 |
Molar Refractivity | 66.92 |
TPSA ? Topological Polar Surface Area: Calculated from |
75.63 ?2 |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
2.1 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
1.95 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
2.26 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
1.97 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.53 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
1.96 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.48 |
Solubility | 0.838 mg/ml ; 0.00333 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-3.16 |
Solubility | 0.173 mg/ml ; 0.000687 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-3.13 |
Solubility | 0.185 mg/ml ; 0.000738 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
No |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
No |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.45 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.56 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
0.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<0.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
1.82 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
100% | With lithium aluminium tetrahydride; In tetrahydrofuran; 1,4-dioxane; at 0 - 20℃; for 16.25h; | LiAI4 (227 mg, 5.97 mmol) was slurried in a mixture of THF (5 mL) and dioxane (5 mL) and cooled to 0 0C under an atmosphere of N2. 4-(tert-Butoxycarbonylamino-methyl)- benzoic acid was dissolved in a mixture of THF (5 mL) and dioxane (5 mL) and added to the chilled solution drop-wise over 15 min. The reaction mixture was allowed to warm to r.t and stirred for 16 h. Water (1 mL) was added to the reaction mixture which was then filtered through celite. The filtrate was evaporated to dryness and the residue partitioned between EtOAc (25 mL) and water (25 mL). The aqueous layer was extracted with EtOAC (2 x 25 mL), the organic layers combined, dried (Na2SO4) and evaporated to dryness to afford the desired product (460 mg, 100%). m/z 260 [M++Na]+ |
94% | Stage 2 - Acid reduction; Stage 1 product (16.1g, 64.14mmol) was stirred in THF (30OmL) and dioxane (20OmL) at O0C under a nitrogen atmosphere. LiAIH4 was then added and the reaction allowed to warm to RT and stir for 16h. It was then cooled to O0C and quenched with sat. NH4Claq. Na2SO4 was added and the mixture stirred for 30 minutes. It was then filtered through celite and the filtrate concentrated in vacuo to give the product as a light yellow solid (13.1g, 94%). m/z = 260 [IvHNa]+. | |
94% | Stage 2 - Preparation of terf-butyl [4-(hydroxymethyl)benzyl]carbamate; Stage 1 product (16.1g, 64.14mmol) was stirred in THF (30OmL) and dioxane (20OmL) at O0C under a nitrogen atmosphere. LiAIH4 was then added and the reaction allowed to warm to RT and stir for 16h. It was then cooled to O0C and quenched with sat. NH4Claq. Na2SO4 was added and the mixture stirred for 30 minutes. It was then filtered through celite and the filtrate concentrated in vacuo to give the product as a light yellow solid (13.1g, 94%). m/z = 260 [M+Na]+. |
53% | To a solution of 4-(tert-Butoxycarbonylamino-methyl)-benzoic acid (5.0 g, 19.7 mmol) in dry THF (50 mL) was added BMS (6.4 mL, 78.9 mmol) at ice temperature and it was stirred at 25 C over a period of 12h. The resulting mixture was quenched with water and solvent was evaporated under reduced pressure to obtain crude mass. The crude mass was diluted with ethyl acetate (500 mL), washed with water (2X150 mL) and dried over sodium sulphate. The residue obtained upon evaporation of volatiles was purified by column chromatography to give (4-Hydroxymethyl-benzyl)-carbamic acid tert-butyl ester as an off-white solid (2.5 g, 53 %). | |
53% | To a solution of 4-(tert-Butoxycarbonylamino-methyl)-benzoic acid (5.0 g, 19.7 mmol) in dry THF (50 mL) was added BMS (6.4 mL, 78.9 mmol) at ice temperature and it was stirred at 25 C. over a period of 12h. The resulting mixture was quenched with water and solvent was evaporated under reduced pressure to obtain crude mass. The crude mass was diluted with ethyl acetate (500 mL), washed with water (2*150 mL) and dried over sodium sulphate. The residue obtained upon evaporation of volatiles was purified by column chromatography to give (4-Hydroxymethyl-benzyl)-carbamic acid tert-butyl ester as an off-white solid (2.5 g, 53%). | |
11.07 g (47%) | With sodium chloride; | 2) Synthesis of 4-[N-(tert-butoxycarbonyl)aminomethyl]-1-phenylmethanol To 100 ml (100 mM) of 1M borane-THF complex was added 25.13 g (100 mM) of 4-[N-(tert-butoxycarbonyl)aminomethyl]benzoic acid at 0 C. and the mixture was stirred at room temperature for 1.5 hours. The reaction was stopped by adding iced water and the reaction mixture was extracted with ethyl acetate. The organic layer was washed with saturated aqueous solution of sodium chloride and dried over MgSO4. The solvent was then distilled off under reduced pressure and the resulting crystal crop was harvested by filtration and rinsed with hexane to provide the title compound as white crystals. Yield 11.07 g (47%) m.p. 88-90 C. 1H-NMR (200 MHz, CDCl3) delta: 1.46 (9H, s), 4.31 (2H, d, J=6.0 Hz), 4.68 (2H, s), 4.76-5.06 (1H, s), 7.23-7.38 (m, 4H). IR (KBr): 3347, 2980, 1686, 1514, 1248, 1171 cm-1. |
With dimethylsulfide borane complex; In tetrahydrofuran; at 20℃; | Carboxylic acid (1.00 eq) was added to a flame-dried flask with a stirbar. Diluted with THF (0.10 M), and the resulting solution was stirred vigorously under Ar at roomtemperature. Added borane-dimethyl sulfide complex (3.50 eq) dropwise via syringe pump at a rate of 6.0 mLlhr, and the resulting reaction mixture was allowed to stir overnight at room temperature under Ar. In the morning, the reaction was quenched dropwise with MeOH at room temperature, ensuring that the ensuing gas expulsion did not become too vigorous. 1 M Aqueous sodium hydroxide was added, and theresulting aqueous layer was extracted 3 times with EtOAc. Combined organic layers were washed once with 1 M aqueous sodium hydroxide, washed once with brine, dried over anhydrous sodium sulfate, filtered, and evaporated under reduced pressure. | |
8.80 g (75.7%) | In tetrahydrofuran; ethyl acetate; | c) Preparation of 4-(tert-butoxycarbonylaminomethyl)benzyl alcohol A suspension of 1.40 g (36.8 mmol) of lithium aluminum hydride in 150 ml of tetrahydrofuran was stirred at 0 C. A solution of 13.0 g (49.0 imol) of 4-(tert-butoxycarbonylaminomethyl)benzoate in 50 ml of tetrahydrofuran was dropwise added slowly to the suspension. After completion of the dropwise addition, the solution was heated to reflux for 2 hours and then cooled to 0 C. After 20 ml of 50% tetrahydrofuran was dropwise added to the reaction mixture, 100 ml of ethyl acetate was added thereto. Insoluble matters were filtered off and the resulting filtrate was concentrated under reduced pressure. The concentrate was isolated and purified by silica gel column chromatography to obtain 8.80 g (75.7%) of 4-(tert-butoxycarbonylaminomethyl)benzyl alcohol. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With sodium hydride; In tetrahydrofuran; | Prepared according to the initial preparation used to prepare Example 11 but Steps M and N are inserted prior to the removal of the ester alcohol. Aminomethylbenzoic acid was first protected with 1 equivalent of BOC and then the N-protected amine was methylated with methyl iodide. The BOC group was subsequently removed and the N-methylaminomethylbenzoic acid was coupled with the tetrapeptide. Step N: N-MethylationThe amine (4.1 mmole) was dissolved in THF and methyl iodide was added, followed by sodium hydride. The reaction was stirred overnight under nitrogen. Workup: the reaction was concentrated on a rotary evaporator and the residue was taken up with ethyl acetate and then washed with water, citric acid, sodium bicarbonate, and brine. The organic solvent was dried over MgSO4. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
65% | With sodium borohydrid; triethylamine; In tetrahydrofuran; | a) 4-[N-(t-butoxycarbonyl)aminomethyl]benzyl alcohol To a stirred solution of 4-[N-(t-butoxycarbonyl)-aminomethyl]benzoic acid (16.5 g, 65 mmol) and triethylamine (10 mL, 71 mmol) in dry THF (500 mL) at 0° C. was added ethyl chloroformate (7.5 mL, 78 mmol) dropwise. After stirring for 15 min, sodium borohydride (6 g, 159 mmol) was added in one portion and the reaction was allowed to warm to RT and stirred for 16 h. The reaction was cooled in an ice bath and carefully quenched with 1N hydrochloric acid, extracted with ethyl acetate, and the organic phase was washed with brine, dried (magnesium sulfate), and concentrated. The residue was purified by flash chromatography (silica gel, 20percent ethyl acetate:chloroform) to give the title compound (10.07 g, 65percent) as a white solid. TLC Rf 0.31 (20percent ethyl acetate:chloroform); 1H NMR (CDCl3) delta1.46 (9H, s), 3.28 (1H, br s), 4.27 (2H, d, J=6 Hz), 4.65 (2H, s), 5.04 (1H, br s), 7.30 (4H, dd). |
Tags: 33233-67-9 synthesis path| 33233-67-9 SDS| 33233-67-9 COA| 33233-67-9 purity| 33233-67-9 application| 33233-67-9 NMR| 33233-67-9 COA| 33233-67-9 structure
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H303 | May be harmful if swallowed |
H304 | May be fatal if swallowed and enters airways |
H305 | May be harmful if swallowed and enters airways |
H310 | Fatal in contact with skin |
H311 | Toxic in contact with skin |
H312 | Harmful in contact with skin |
H313 | May be harmful in contact with skin |
H314 | Causes severe skin burns and eye damage |
H315 | Causes skin irritation |
H316 | Causes mild skin irritation |
H317 | May cause an allergic skin reaction |
H318 | Causes serious eye damage |
H319 | Causes serious eye irritation |
H320 | Causes eye irritation |
H330 | Fatal if inhaled |
H331 | Toxic if inhaled |
H332 | Harmful if inhaled |
H333 | May be harmful if inhaled |
H334 | May cause allergy or asthma symptoms or breathing difficulties if inhaled |
H335 | May cause respiratory irritation |
H336 | May cause drowsiness or dizziness |
H340 | May cause genetic defects |
H341 | Suspected of causing genetic defects |
H350 | May cause cancer |
H351 | Suspected of causing cancer |
H360 | May damage fertility or the unborn child |
H361 | Suspected of damaging fertility or the unborn child |
H361d | Suspected of damaging the unborn child |
H362 | May cause harm to breast-fed children |
H370 | Causes damage to organs |
H371 | May cause damage to organs |
H372 | Causes damage to organs through prolonged or repeated exposure |
H373 | May cause damage to organs through prolonged or repeated exposure |
Environmental hazards | |
Code | Phrase |
H400 | Very toxic to aquatic life |
H401 | Toxic to aquatic life |
H402 | Harmful to aquatic life |
H410 | Very toxic to aquatic life with long-lasting effects |
H411 | Toxic to aquatic life with long-lasting effects |
H412 | Harmful to aquatic life with long-lasting effects |
H413 | May cause long-lasting harmful effects to aquatic life |
H420 | Harms public health and the environment by destroying ozone in the upper atmosphere |
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