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Chemical Structure| 2613-34-5 Chemical Structure| 2613-34-5

Structure of 2613-34-5

Chemical Structure| 2613-34-5

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CAS No.: 2613-34-5

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Product Details of [ 2613-34-5 ]

CAS No. :2613-34-5
Formula : C6H4ClF2N
M.W : 163.55
SMILES Code : C1=C(C(=C(C(=C1)F)Cl)F)N
MDL No. :MFCD00042200
Boiling Point : No data available
InChI Key :BNTNWQPIBPBJOO-UHFFFAOYSA-N
Pubchem ID :223089

Safety of [ 2613-34-5 ]

GHS Pictogram:
Signal Word:Warning
Hazard Statements:H302-H315-H319-H335
Precautionary Statements:P261-P305+P351+P338

Computational Chemistry of [ 2613-34-5 ] Show Less

Physicochemical Properties

Num. heavy atoms 10
Num. arom. heavy atoms 6
Fraction Csp3 0.0
Num. rotatable bonds 0
Num. H-bond acceptors 2.0
Num. H-bond donors 1.0
Molar Refractivity 35.77
TPSA ?

Topological Polar Surface Area: Calculated from
Ertl P. et al. 2000 J. Med. Chem.

26.02 ?2

Lipophilicity

Log Po/w (iLOGP)?

iLOGP: in-house physics-based method implemented from
Daina A et al. 2014 J. Chem. Inf. Model.

1.56
Log Po/w (XLOGP3)?

XLOGP3: Atomistic and knowledge-based method calculated by
XLOGP program, version 3.2.2, courtesy of CCBG, Shanghai Institute of Organic Chemistry

2.07
Log Po/w (WLOGP)?

WLOGP: Atomistic method implemented from
Wildman SA and Crippen GM. 1999 J. Chem. Inf. Model.

3.05
Log Po/w (MLOGP)?

MLOGP: Topological method implemented from
Moriguchi I. et al. 1992 Chem. Pharm. Bull.
Moriguchi I. et al. 1994 Chem. Pharm. Bull.
Lipinski PA. et al. 2001 Adv. Drug. Deliv. Rev.

2.94
Log Po/w (SILICOS-IT)?

SILICOS-IT: Hybrid fragmental/topological method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

2.62
Consensus Log Po/w?

Consensus Log Po/w: Average of all five predictions

2.45

Water Solubility

Log S (ESOL):?

ESOL: Topological method implemented from
Delaney JS. 2004 J. Chem. Inf. Model.

-2.6
Solubility 0.409 mg/ml ; 0.0025 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (Ali)?

Ali: Topological method implemented from
Ali J. et al. 2012 J. Chem. Inf. Model.

-2.25
Solubility 0.929 mg/ml ; 0.00568 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble
Log S (SILICOS-IT)?

SILICOS-IT: Fragmental method calculated by
FILTER-IT program, version 1.0.2, courtesy of SILICOS-IT, http://www.silicos-it.com

-3.2
Solubility 0.102 mg/ml ; 0.000627 mol/l
Class?

Solubility class: Log S scale
Insoluble < -10 < Poorly < -6 < Moderately < -4 < Soluble < -2 Very < 0 < Highly

Soluble

Pharmacokinetics

GI absorption?

Gatrointestinal absorption: according to the white of the BOILED-Egg

High
BBB permeant?

BBB permeation: according to the yolk of the BOILED-Egg

Yes
P-gp substrate?

P-glycoprotein substrate: SVM model built on 1033 molecules (training set)
and tested on 415 molecules (test set)
10-fold CV: ACC=0.72 / AUC=0.77
External: ACC=0.88 / AUC=0.94

No
CYP1A2 inhibitor?

Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.83 / AUC=0.90
External: ACC=0.84 / AUC=0.91

No
CYP2C19 inhibitor?

Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set)
and tested on 3000 molecules (test set)
10-fold CV: ACC=0.80 / AUC=0.86
External: ACC=0.80 / AUC=0.87

No
CYP2C9 inhibitor?

Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set)
and tested on 2075 molecules (test set)
10-fold CV: ACC=0.78 / AUC=0.85
External: ACC=0.71 / AUC=0.81

No
CYP2D6 inhibitor?

Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set)
and tested on 1068 molecules (test set)
10-fold CV: ACC=0.79 / AUC=0.85
External: ACC=0.81 / AUC=0.87

No
CYP3A4 inhibitor?

Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set)
and tested on 2579 molecules (test set)
10-fold CV: ACC=0.77 / AUC=0.85
External: ACC=0.78 / AUC=0.86

No
Log Kp (skin permeation)?

Skin permeation: QSPR model implemented from
Potts RO and Guy RH. 1992 Pharm. Res.

-5.83 cm/s

Druglikeness

Lipinski?

Lipinski (Pfizer) filter: implemented from
Lipinski CA. et al. 2001 Adv. Drug Deliv. Rev.
MW ≤ 500
MLOGP ≤ 4.15
N or O ≤ 10
NH or OH ≤ 5

0.0
Ghose?

Ghose filter: implemented from
Ghose AK. et al. 1999 J. Comb. Chem.
160 ≤ MW ≤ 480
-0.4 ≤ WLOGP ≤ 5.6
40 ≤ MR ≤ 130
20 ≤ atoms ≤ 70

None
Veber?

Veber (GSK) filter: implemented from
Veber DF. et al. 2002 J. Med. Chem.
Rotatable bonds ≤ 10
TPSA ≤ 140

0.0
Egan?

Egan (Pharmacia) filter: implemented from
Egan WJ. et al. 2000 J. Med. Chem.
WLOGP ≤ 5.88
TPSA ≤ 131.6

0.0
Muegge?

Muegge (Bayer) filter: implemented from
Muegge I. et al. 2001 J. Med. Chem.
200 ≤ MW ≤ 600
-2 ≤ XLOGP ≤ 5
TPSA ≤ 150
Num. rings ≤ 7
Num. carbon > 4
Num. heteroatoms > 1
Num. rotatable bonds ≤ 15
H-bond acc. ≤ 10
H-bond don. ≤ 5

2.0
Bioavailability Score?

Abbott Bioavailability Score: Probability of F > 10% in rat
implemented from
Martin YC. 2005 J. Med. Chem.

0.55

Medicinal Chemistry

PAINS?

Pan Assay Interference Structures: implemented from
Baell JB. & Holloway GA. 2010 J. Med. Chem.

0.0 alert
Brenk?

Structural Alert: implemented from
Brenk R. et al. 2008 ChemMedChem

2.0 alert: heavy_metal
Leadlikeness?

Leadlikeness: implemented from
Teague SJ. 1999 Angew. Chem. Int. Ed.
250 ≤ MW ≤ 350
XLOGP ≤ 3.5
Num. rotatable bonds ≤ 7

No; 1 violation:MW<1.0
Synthetic accessibility?

Synthetic accessibility score: from 1 (very easy) to 10 (very difficult)
based on 1024 fragmental contributions (FP2) modulated by size and complexity penaties,
trained on 12'782'590 molecules and tested on 40 external molecules (r2 = 0.94)

1.43

Application In Synthesis of [ 2613-34-5 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Downstream synthetic route of [ 2613-34-5 ]

[ 2613-34-5 ] Synthesis Path-Downstream   1~32

  • 2
  • [ 2613-34-5 ]
  • [ 407-25-0 ]
  • [ 170098-82-5 ]
  • 3
  • [ 2613-34-5 ]
  • [ 105-53-3 ]
  • N-(3-Chloro-2,4-difluoro-phenyl)-malonamic acid ethyl ester [ No CAS ]
  • 5
  • [ 2613-34-5 ]
  • [ 201849-12-9 ]
YieldReaction ConditionsOperation in experiment
With N-Bromosuccinimide; In N-methyl-acetamide; hexane; water; 18.9 g of N-bromosuccinimide was gradually added to a stirred solution of 17.4 g of <strong>[2613-34-5]3-chloro-2,4-difluoroaniline</strong> in 150 cm3 of dry dimethylformamide, cooled to a temperature in the region of -20 C., while this temperature was maintained. After stirring for 1 hour, the temperature was brought to the region of 20 C. and then the mixture was concentrated under reduced pressure (5 kPa), at a temperature in the region of 60 C. The residue obtained was supplemented with 400 cm3 of hexane and 200 cm3 of water. The mixture was stirred and the aqueous phase decanted off. The latter was extracted three times with successively 200, 200, and 100 cm3 of hexane. The extracts were combined, washed twice with 200 cm3 of water and twice with 200 cm3 of a saturated aqueous sodium chloride solution. After drying over magnesium sulphate, the organic solution was concentrated under reduced pressure (5 kPa) at a temperature in the region of 40 C. 19.2 g of 2-bromo-5-chloro-4,6-difluoroaniline was obtained in the form of a white solid, which melted at 62 C. 3-Chloro-2,4-difluoroaniline was prepared in the following manner:
  • 6
  • [ 3847-58-3 ]
  • [ 2613-34-5 ]
YieldReaction ConditionsOperation in experiment
57% Comparative Example 3 Comparative Example 2 is repeated with 90 mg of catalyst and 14.8 g of 3-chloro-2,4-difluoronitrobenzene. The duration of the reaction is 400 min. The degree of conversion of the nitrated derivative is 100%. The 3-chloro-2,4-difluoroaniline yield is 57%. The remainder is still composed of the same by-products as in Comparative Examples 1 and 2.
  • 13
  • [ 2613-34-5 ]
  • 8-chloro-9-[4-(4-chloro-3-fluoro-phenyl)-piperazin-1-yl]-7-fluoro-4-methyl-1-oxo-1,4-dihydro-benzo[<i>f</i>][1,7]naphthyridine-2-carboxylic acid [ No CAS ]
  • 14
  • [ 2613-34-5 ]
  • 8-chloro-7-fluoro-9-[4-(3-fluoro-4-methyl-phenyl)-piperazin-1-yl]-4-methyl-1-oxo-1,4-dihydro-benzo[<i>f</i>][1,7]naphthyridine-2-carboxylic acid [ No CAS ]
  • 16
  • [ 2613-34-5 ]
  • 8-chloro-9-[4-(4-chloro-3-fluoro-phenyl)-piperazin-1-yl]-7-fluoro-4-methyl-1-oxo-1,4-dihydro-benzo[<i>f</i>][1,7]naphthyridine-2-carboxylic acid ethyl ester [ No CAS ]
  • 17
  • [ 2613-34-5 ]
  • 8-chloro-9-fluoro-7-[4-(3-fluoro-4-methyl-phenyl)-piperazin-1-yl]-4-methyl-1-oxo-1,4-dihydro-benzo[<i>f</i>][1,7]naphthyridine-2-carboxylic acid ethyl ester [ No CAS ]
  • 18
  • [ 2613-34-5 ]
  • 8-chloro-7-[4-(4-chloro-3-fluoro-phenyl)-piperazin-1-yl]-9-fluoro-4-methyl-1-oxo-1,4-dihydro-benzo[<i>f</i>][1,7]naphthyridine-2-carboxylic acid ethyl ester [ No CAS ]
  • 19
  • [ 2613-34-5 ]
  • [ 180002-38-4 ]
  • 20
  • [ 2613-34-5 ]
  • N-(3-Chloro-2,4-difluoro-phenyl)-malonamic acid [ No CAS ]
  • 21
  • [ 2613-34-5 ]
  • 7-chloro-6,8-difluoro-1,2,3,4-tetrahydroquinoline-2,3,4-trione 3-oxime [ No CAS ]
  • 25
  • [ 2613-34-5 ]
  • 7-chloro-6,8-difluoro-5-nitro-1,4-dihydroquinoxaline-2,3-dione [ No CAS ]
  • 27
  • [ 2613-34-5 ]
  • [ 1979-23-3 ]
  • 28
  • [ 612501-45-8 ]
  • [ 2613-34-5 ]
  • [ 848491-25-8 ]
YieldReaction ConditionsOperation in experiment
85% With hydrogenchloride; In isopropyl alcohol; at 80℃; for 3h; 3-Chloro-2,4-difluoroaniline (1.7 g, 10.1 mmol) and 5N hydrogen chloride in isopropanol (2 ml) were added to a suspension of tert-butyl 4- [ (4-CHLORO-7- METHOXYQUINAZOLIN-6-YL) OXY] PIPERIDINE-1-CARBOXYLATE (4 g, 10.1 mmol, PCT Int. Appl. W02003082831, AstraZeneca) in isopropanol (50 ml). The mixture was stirred at 80C for 3 hours. After evaporation of the solvents, the residue was purified by chromatography on silica gel (eluant: 5-10% 7N methanolic ammonia in dichloromethane) to give 4- (3-CHLORO- 2, 4-DIFLUOROANILINO)-7-METHOXY-6-[(PIPERIDIN-4-YL) oxy] quinazoline (3.63 g, 85%) as a white solid. 'H NMR Spectrum : (CDCI3+ CD3CO2D) : 2.15 (m, 2H), 2.30 (m, 2H), 3.34 (m, 2H), 3.47 (m, 2H), 4.01 (s, 3H), 4.91 (m, 1H), 7.03 (m, 1H), 7.58 (m, 2H), 7.90 (s, 1H), 8.55 (s, 1H) ; Mass spectrum: MH+ 421.
85% With hydrogenchloride; In isopropyl alcohol; at 80℃; for 3h; 3-CHLORO-2, 4-DIFLUOROANILINE (1.7 g, 10.1 mmol) and 5N hydrogen chloride in isopropanol (2 ml) were added to a suspension of tert-butyl 4- [ (4-CHLORO-7-METHOXYQUINAZOLIN-6- yl) oxy] PIPERIDINE-1-CARBOXYLATE (4 g, 10.1 mmol, PCT Int. Appl. W02003082831, AstraZeneca) in isopropanol (50 ml). The mixture was stirred at 80C for 3 hours. After evaporation of the solvents, the residue was purified by chromatography on silica gel (eluant: 5-10% 7N methanolic ammonia in dichloromethane) to give 4- (3-CHLORO-2, 4-difluoroanilino) - 7-METHOXY-6-[(PIPERIDIN-4-YL) OXY] QUINAZOLINE (3.63 g, 85%) as a white solid. HNMR Spectrum: (CDC13 + CD3CO2D) : 2.15 (m, 2H), 2.30 (m, 2H), 3.34 (m, 2H), 3.47 (m, 2H), 4.01 (s, 3H), 4.91 (m, 1H), 7.03 (m, 1H), 7.58 (m, 2H), 7.90 (s, 1H), 8.55 (s, 1H) ; Mass spectrum: MH+ 421.
  • 29
  • [ 36556-48-6 ]
  • [ 2613-34-5 ]
  • [ 367-25-9 ]
YieldReaction ConditionsOperation in experiment
99% With sodium hydroxide;palladium; In hydrogenchloride; methanol; water; Example 7 88 ml of methanol, 44 ml of water, 0.2 g of palladium-on-charcoal containing 10% Pd and 0.04 mol of <strong>[2613-34-5]3-chloro-2,4-difluoroaniline</strong> are charged to the same reactor as that of Example 6. A hydrogen pressure is introduced in the reactor, which is heated to 90 C. The hydrogen pressure is kept constant at 1.9*106 Pa absolute at 90 C. During the reaction, sodium hydroxide is added in proportion as hydrochloric acid is given off until an amount is reached which is comparable with that used for a corresponding amount of chlorodifluoroaniline in Example 6. After a period of 3 hours, the degree of conversion of the <strong>[2613-34-5]3-chloro-2,4-difluoroaniline</strong> is 100% and the 2,4-difluoroaniline yield is 99%. The remainder of the conversion product (1%) is composed of 4-fluoroaniline and of traces of aniline.
  • 30
  • [ 2613-34-5 ]
  • [ 170098-82-5 ]
YieldReaction ConditionsOperation in experiment
In 1,4-dioxane; (2S)-N-methyl-1-phenylpropan-2-amine hydrate; trifluoroacetic anhydride; 3-Chloro-2,4-difluoro-(trifluoroacetamido)benzene. To a solution of 10.5 g (64.3 mmol) of <strong>[2613-34-5]3-chloro-2,4-difluoroaniline</strong> in 25 mL of dioxane kept in an ice-bath was added dropwise 10 mL (14.8 g, 70.4 mmol) of trifluoroacetic anhydride. The solution was stirred at room temperature for 20 h. It was then added to 150 mL of ice-water and the mixture was stirred for 1 h. It was filtered, washed with water, and dried to leave an almost colorless solid 16.1 g (96%); mp 73-74 C.; 1 H NMR (CDCl3), 7.068 (m, 1), 7.976 (mb, 1), 8.146 (m, 1).
In 1,4-dioxane; (2S)-N-methyl-1-phenylpropan-2-amine hydrate; trifluoroacetic anhydride; 3-Chloro-2,4-difluoro-(trifluoroacetamido)benzene To a solution of 10.5 g (64.3 mmol) of <strong>[2613-34-5]3-chloro-2,4-difluoroaniline</strong> in 25 mL of dioxane kept in an ice-bath was added dropwise 10 mL (14.8 g, 70.4 mmol) of trifluoroacetic anhydride. The solution was stirred at room temperature for 20 h. It was then added into 150 mL of ice-water and the mixture was stirred for 1 h. It was filtered and washed by water, and dried to leave almost colorless solid 16.1 g (96%), mp 73-74 C. 1 H NMR (CDCl3), 7.068 (m, 1), 7.976 (mb, 1), 8.146 (m, 1).
  • 31
  • tin(II)chloride dihydrate [ No CAS ]
  • [ 3847-58-3 ]
  • [ 2613-34-5 ]
YieldReaction ConditionsOperation in experiment
In hydrogenchloride; water; 135 g of tin(II) chloride (dihydrate) was added in small fractions to a stirred suspension of 23 g of 3-chloro-2,4-difluoronitrobenzene in 110 cm3 of a 37% aqueous hydrochloric acid solution and 25 cm'of diethyl ether. After the addition, the mixture was heated for 30 minutes at a temperature in the region of 40 C. After cooling the reaction mass, the mixture was poured over 300 cm3 of water supplemented with 150 g of ice. The mixture was made highly alkaline by addition of caustic soda, and then extracted twice with 250 cm3 of chloroform. The extracts were combined, dried over magnesium sulphate, and then concentrated under reduced pressure (5 kPa) at a temperature in the region of 40 C. 17.4 g of 3-chloro-2,4-difluoroaniline was obtained in the form of a beige solid, which melted at 58 C.
  • 32
  • [ 3934-20-1 ]
  • [ 2613-34-5 ]
  • [ 1051899-83-2 ]
YieldReaction ConditionsOperation in experiment
36% With N-ethyl-N,N-diisopropylamine; for 24h;Heating / reflux; A mixture of 2,4-dichloropyrimidine (6.0 g, 40.5 mmol), <strong>[2613-34-5]3-chloro-2,4-difluoroaniline</strong> (6.28 g, 38.5 mmol), diisopropylethylamine (9.16 ml, 52.7 mmol) and pentanol (20 ml) was refluxed for 24 hrs. After concentration under reduced pressure, the residue was dissolved in ethyl acetate and the solution washed with water, dried and concentrated. The crude material was triturated in methylene chloride and the white solid collected by filtration to give 2.1 g of the desired product. The filtrate was concentrated and purified on silica gel (10 to 50% EtOAc in petroleum ether) to give another 1.9 g of material (total yield 4.0 g, 36%). NMR Spectrum (500 MHz, DMSOd6) 6.80 (d, IH), 7.38 (ddd, IH), 7.74 (ddd, IH), 8.21 (d, IH), 9.95 (bs, IH); Mass Spectrum MH+ 276.
36% With N-ethyl-N,N-diisopropylamine; In pentan-1-ol; for 24h;Heating / reflux; 2-chloro-N-(3-chloro-2,4-difluoro-phenyl)pyrimidin-4-amineA mixture of 2,4-dichloropyrimidine (6.0 g, 40.5 mmol), <strong>[2613-34-5]3-chloro-2,4-difluoroaniline</strong> (6.28 g, 38.5 mmol), diisopropylethylamine (9.16 ml, 52.7 mmol) and pentanol (20 ml) was refluxed for 24 hours. After concentration under reduced pressure, the residue was dissolved in ethyl acetate and the solution washed with water, dried and concentrated. The crude material was triturated in methylene chloride and the white solid collected by <n="60"/>filtration to give 2.1 g of the desired product. The filtrate was concentrated and purified on silica gel (10 to 50% EtOAc in petroleum ether) to give another 1.9 g of material (total yield 4.0 g, 36%). NMR Spectrum (500 MHz, DMSOd) 6.80 (d, IH), 7.38 (ddd, IH), 7.74 (ddd, IH), 8.21 (d, IH), 9.95 (bs, IH); Mass Spectrum MH+ 276.
 

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