Structure of 13544-06-4
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CAS No. : | 13544-06-4 |
Formula : | C9H5F3N2O2 |
M.W : | 230.14 |
SMILES Code : | [O-][N+](=O)C1=C(CC#N)C=CC(=C1)C(F)(F)F |
MDL No. : | MFCD00045621 |
InChI Key : | CSRSFUABKGQLSY-UHFFFAOYSA-N |
Pubchem ID : | 2775792 |
GHS Pictogram: |
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Signal Word: | Warning |
Hazard Statements: | H302-H315-H319-H335 |
Precautionary Statements: | P261-P305+P351+P338 |
Num. heavy atoms | 16 |
Num. arom. heavy atoms | 6 |
Fraction Csp3 | 0.22 |
Num. rotatable bonds | 3 |
Num. H-bond acceptors | 6.0 |
Num. H-bond donors | 0.0 |
Molar Refractivity | 49.79 |
TPSA ? Topological Polar Surface Area: Calculated from |
69.61 ?2 |
Log Po/w (iLOGP)? iLOGP: in-house physics-based method implemented from |
1.36 |
Log Po/w (XLOGP3)? XLOGP3: Atomistic and knowledge-based method calculated by |
2.29 |
Log Po/w (WLOGP)? WLOGP: Atomistic method implemented from |
3.83 |
Log Po/w (MLOGP)? MLOGP: Topological method implemented from |
2.44 |
Log Po/w (SILICOS-IT)? SILICOS-IT: Hybrid fragmental/topological method calculated by |
1.07 |
Consensus Log Po/w? Consensus Log Po/w: Average of all five predictions |
2.2 |
Log S (ESOL):? ESOL: Topological method implemented from |
-2.79 |
Solubility | 0.374 mg/ml ; 0.00163 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (Ali)? Ali: Topological method implemented from |
-3.39 |
Solubility | 0.0939 mg/ml ; 0.000408 mol/l |
Class? Solubility class: Log S scale |
Soluble |
Log S (SILICOS-IT)? SILICOS-IT: Fragmental method calculated by |
-3.16 |
Solubility | 0.158 mg/ml ; 0.000687 mol/l |
Class? Solubility class: Log S scale |
Soluble |
GI absorption? Gatrointestinal absorption: according to the white of the BOILED-Egg |
High |
BBB permeant? BBB permeation: according to the yolk of the BOILED-Egg |
Yes |
P-gp substrate? P-glycoprotein substrate: SVM model built on 1033 molecules (training set) |
No |
CYP1A2 inhibitor? Cytochrome P450 1A2 inhibitor: SVM model built on 9145 molecules (training set) |
Yes |
CYP2C19 inhibitor? Cytochrome P450 2C19 inhibitor: SVM model built on 9272 molecules (training set) |
Yes |
CYP2C9 inhibitor? Cytochrome P450 2C9 inhibitor: SVM model built on 5940 molecules (training set) |
No |
CYP2D6 inhibitor? Cytochrome P450 2D6 inhibitor: SVM model built on 3664 molecules (training set) |
No |
CYP3A4 inhibitor? Cytochrome P450 3A4 inhibitor: SVM model built on 7518 molecules (training set) |
No |
Log Kp (skin permeation)? Skin permeation: QSPR model implemented from |
-6.08 cm/s |
Lipinski? Lipinski (Pfizer) filter: implemented from |
0.0 |
Ghose? Ghose filter: implemented from |
None |
Veber? Veber (GSK) filter: implemented from |
0.0 |
Egan? Egan (Pharmacia) filter: implemented from |
0.0 |
Muegge? Muegge (Bayer) filter: implemented from |
0.0 |
Bioavailability Score? Abbott Bioavailability Score: Probability of F > 10% in rat |
0.55 |
PAINS? Pan Assay Interference Structures: implemented from |
0.0 alert |
Brenk? Structural Alert: implemented from |
2.0 alert: heavy_metal |
Leadlikeness? Leadlikeness: implemented from |
No; 1 violation:MW<1.0 |
Synthetic accessibility? Synthetic accessibility score: from 1 (very easy) to 10 (very difficult) |
2.05 |
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
77% | 1.75 g (7.6 mmol) (2-Nitro-4-trifluoromethylphenyl)-acetonitrile in 20 ml THF are cooled to 0C in a nitrogen atmosphere and treated with 60 mi BH3/THF- complex (1 M in THF). The reaction mixture is allowed to slowly warm up to room temperature overnight. After 72 h the reaction solution is slowly given to 50 ml 5 N HO gegeben and then 1 h heated to reflux. The reaction mixture is evaporated to dryness, the residue made alkaline (pH 12-14) with 25% NaOH solution and extracted 2x with 100 mi ethylacetate. The combined organic phases are washed with brine, dried using Na2SO4, filtered and evaporated. Yield : 1.8 g (77 %) 112, brown oil |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With 18-crown-6 ether; potassium tert-butylate; In tetrahydrofuran; at -78 - 70℃; for 4.83333h; | Step 1. Preparation of 2-Methyl-2-(2-nitro-4- trifluoromethyl-phenyl) -propionitrile; The title compound was synthesized according to a method described in Prasad, G. , J. Org. Chem. 1991,56, 7188-7190. To a yellow-brown solution of (2-Nitro-4-trifluoromethyl- phenyl) -acetonitrile (2.5 g, 11 mmol), 18-crown-6 (0.72 g, 2.7 mmol), and methyl iodide (1.5 mL, 24 mmol) in dry THF under nitrogen at-78 degrees C was added potassium tert- butoxide (2.7 g, 24 mmol) in one portion. The reaction immediately became a deep purple color. The reaction was allowed to stir for 2 h at-78 degrees C, and was then warmed to ambient temperature. A water-cooled reflux condenser was added and the solution heated to 70 degrees C under nitrogen. Over 40 minutes, the color changed from dark purple to cloudy gray. The mixture was allowed to cool to room temperature, and was concentrated in vacuo. The resulting material was partitioned between 1 N HCI and EtOAc. The organic layer was washed once with brine, dried over sodium sulfate, filtered, and concentrated in vacuo to give a brown oil which was judged to be primarily monoalkylated nitrile. The crude material was resubjected to the reaction conditions using 18-crown-6 (0.72 mg, 2.7 mmol), methyl iodide (0.75 mL, 12 mmol), and potassium tert- butoxide (1.4 g, 12 mmol) as before, with the following modifications: the reaction was allowed to stir only 10 min. at-78 degrees C before being warmed to room temperature, and the reaction vessel was sealed and heated to 70 degrees C for 2 h. Upon cooling to room temperature, the reaction was quenched and worked up as before. Purification by flash chromatography afforded the desired product as a light brown solid. MS (M+H) + = 259; Calc'd 258.20 for C11H9F3N2O2. |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
A solution containing <strong>[13544-06-4][2-nitro-4-(trifluoromethyl)phenyl]acetonitrile</strong> (0.206 g), sodium azide (0.064 g), zinc bromide (0.203 g), water (1.8 ml_), and isopropanol (0.18 mL) was brought to reflux for 48 hours. After cooling to room temperature, the mixture was diluted with ether (3 mL), and the layers were separated. The aqueous layer was diluted with 2N HCI and reextracted with ethyl acetate. The ethyl acetate layer was dried over Na2SO4, filtered, and concentrated to provide the title product (0.17 g). HPLC Rt = 2.4 minutes; m/z [MH]+ = 274 |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
With acetyl chloride; at 0℃; | To a sealable tube containing methanol (10 ml_) at 0 0C was added acetyl chloride (12 ml_) dropwise. [2-Nitro-4-(trifluoromethyl)phenyl]acetonitrile was then added. The tube was sealed and allowed to stand at 0 0C overnight. The resulting precipitate was filtered, washed with ether, and dried to provide the title product (5.3 g). HPLC Rt = 2.8 minutes |
Yield | Reaction Conditions | Operation in experiment |
---|---|---|
96% | General procedure: 2-Nitrophenylacetonitrile1 (1 mmol) in tetrahydrofuran (3 mL)was added with stirring to sodium hydride (0.042g, 1.05 mmol, 60% suspension inoil) in tetrahydrofuran (20 mL). The reaction mixture turned deep purple andwas stirred for 6 min . Then acrylonitrile (0.11 g, 2 mmol) in tetrahydrofuran(1 mL) was added during 2 min. The reaction mixture was stirred for 25 min atroom temperature and then dissolved in ethyl acetate (50 mL) and poured intosaturated aqueous NH4Cl (25 mL). The aqueous phase was extractedwith ethyl acetate (2x20 mL). Combined extract was washed with brine and driedwith Na2SO4. After evaporation of the solvent the crudeproduct was subjected to column chromatography on SiO2 with hexane-ethylacetate 2:1 then gradually changed to pure ethyl acetate |
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